Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.4□□□□□ -0.58
Matn3O35701 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.4□□□□□ -0.58
Matn3O35701 Gm42913-201ENSMUST00000197936 1853 ntBASIC11.4□□□□□ -0.58
Matn3O35701 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.4□□□□□ -0.58
Matn3O35701 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Matn3O35701 Gm4735-201ENSMUST00000138679 1302 ntBASIC11.4□□□□□ -0.58
Matn3O35701 Gm5855-201ENSMUST00000200240 1305 ntBASIC11.4□□□□□ -0.58
Matn3O35701 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.4□□□□□ -0.58
Matn3O35701 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.4□□□□□ -0.58
Matn3O35701 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.4□□□□□ -0.58
Matn3O35701 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Gm11978-201ENSMUST00000122315 466 ntBASIC11.4□□□□□ -0.58
Matn3O35701 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC11.4□□□□□ -0.58
Matn3O35701 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.4□□□□□ -0.58
Matn3O35701 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.4□□□□□ -0.58
Matn3O35701 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.4□□□□□ -0.58
Matn3O35701 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Matn3O35701 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Matn3O35701 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.4□□□□□ -0.58
Matn3O35701 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Matn3O35701 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC11.4□□□□□ -0.58
Matn3O35701 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Matn3O35701 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Matn3O35701 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Matn3O35701 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.4□□□□□ -0.59
Matn3O35701 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Matn3O35701 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Matn3O35701 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Matn3O35701 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Matn3O35701 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Matn3O35701 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.39□□□□□ -0.59
Matn3O35701 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Matn3O35701 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Matn3O35701 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Matn3O35701 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Matn3O35701 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.39□□□□□ -0.59
Matn3O35701 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC11.39□□□□□ -0.59
Matn3O35701 Gm15487-201ENSMUST00000122373 465 ntBASIC11.39□□□□□ -0.59
Matn3O35701 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
Matn3O35701 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.39□□□□□ -0.59
Matn3O35701 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.39□□□□□ -0.59
Matn3O35701 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Matn3O35701 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Matn3O35701 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Matn3O35701 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Matn3O35701 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Matn3O35701 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Matn3O35701 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.38□□□□□ -0.59
Matn3O35701 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Matn3O35701 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Syt7-204ENSMUST00000223586 1344 ntBASIC11.38□□□□□ -0.59
Matn3O35701 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Matn3O35701 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Matn3O35701 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Matn3O35701 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Matn3O35701 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms