Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Polr1aO35134 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC18.93■□□□□ 0.62
Polr1aO35134 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Polr1aO35134 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC18.92■□□□□ 0.62
Polr1aO35134 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC18.92■□□□□ 0.62
Polr1aO35134 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC18.92■□□□□ 0.62
Polr1aO35134 Gm18367-201ENSMUST00000176139 600 ntBASIC18.92■□□□□ 0.62
Polr1aO35134 Gm4654-201ENSMUST00000183305 982 ntBASIC18.92■□□□□ 0.62
Polr1aO35134 Gm44158-201ENSMUST00000203881 505 ntBASIC18.92■□□□□ 0.62
Polr1aO35134 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC18.92■□□□□ 0.62
Polr1aO35134 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Polr1aO35134 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Gm8038-201ENSMUST00000164674 2044 ntBASIC18.92■□□□□ 0.62
Polr1aO35134 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Zfp125-201ENSMUST00000079237 2488 ntBASIC18.92■□□□□ 0.62
Polr1aO35134 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Polr1aO35134 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Polr1aO35134 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Gm42518-201ENSMUST00000196277 938 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 Gm3028-201ENSMUST00000213805 1119 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 CT025551.1-201ENSMUST00000223996 692 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 AC115122.1-201ENSMUST00000224850 1040 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC18.91■□□□□ 0.62
Polr1aO35134 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Polr1aO35134 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Polr1aO35134 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
Polr1aO35134 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Polr1aO35134 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Polr1aO35134 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Gm12516-201ENSMUST00000120819 385 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 Gm16397-201ENSMUST00000122201 494 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Polr1aO35134 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Polr1aO35134 Gm25072-201ENSMUST00000175233 235 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 Gm9034-201ENSMUST00000182071 1005 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 Gm45113-201ENSMUST00000207518 165 ntBASIC18.91■□□□□ 0.62
Polr1aO35134 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC18.91■□□□□ 0.62
Polr1aO35134 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Polr1aO35134 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Polr1aO35134 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
Polr1aO35134 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC18.9■□□□□ 0.62
Polr1aO35134 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC18.9■□□□□ 0.62
Polr1aO35134 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC18.9■□□□□ 0.62
Polr1aO35134 Vmn1r38-201ENSMUST00000226457 3462 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Polr1aO35134 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC18.9■□□□□ 0.62
Polr1aO35134 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC18.9■□□□□ 0.62
Polr1aO35134 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Polr1aO35134 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Polr1aO35134 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Polr1aO35134 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Polr1aO35134 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Polr1aO35134 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC18.89■□□□□ 0.62
Polr1aO35134 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms