Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm4879-201ENSMUST00000122190 1272 ntBASIC12.64□□□□□ -0.39
Col4a6B1AVK5 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm22442-201ENSMUST00000157256 144 ntBASIC12.64□□□□□ -0.39
Col4a6B1AVK5 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm5100-201ENSMUST00000195631 589 ntBASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Gm19009-201ENSMUST00000223072 823 ntBASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Col4a6B1AVK5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Gm17213-201ENSMUST00000165161 1360 ntBASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Gm17889-201ENSMUST00000198410 598 ntBASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Gm2875-201ENSMUST00000211333 360 ntBASIC12.63□□□□□ -0.39
Col4a6B1AVK5 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.63□□□□□ -0.39
Col4a6B1AVK5 CT025553.1-201ENSMUST00000226292 299 ntBASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Lyplal1-201ENSMUST00000045388 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Col4a6B1AVK5 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Gm11660-201ENSMUST00000120955 412 ntBASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.62□□□□□ -0.39
Col4a6B1AVK5 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Col4a6B1AVK5 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Col4a6B1AVK5 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms