Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ccdc112A0AUP1 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 AC098716.1-201ENSMUST00000213527 703 ntBASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Gm24526-201ENSMUST00000082921 158 ntBASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ccdc112A0AUP1 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Mup-ps23-201ENSMUST00000118063 630 ntBASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Gm4271-201ENSMUST00000174444 973 ntBASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Gm7067-201ENSMUST00000207698 1249 ntBASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Gm29705-201ENSMUST00000212598 474 ntBASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Gm44260-201ENSMUST00000204946 2094 ntBASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Gm44831-201ENSMUST00000208469 2989 ntBASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc112A0AUP1 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Gm1995-201ENSMUST00000220838 2602 ntBASIC14.29□□□□□ -0.12
Ccdc112A0AUP1 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms