Protein–RNA interactions for Protein: Q9Z2Q5

Mrpl40, 39S ribosomal protein L40, mitochondrial, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl40Q9Z2Q5 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm11591-201ENSMUST00000120063 702 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm7809-201ENSMUST00000153199 742 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm38114-201ENSMUST00000191877 1232 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm37489-201ENSMUST00000191883 159 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm38241-201ENSMUST00000192641 898 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 AC022775.2-201ENSMUST00000227885 646 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Mrpl40Q9Z2Q5 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm12363-201ENSMUST00000122250 668 ntBASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm2991-201ENSMUST00000173338 480 ntBASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm28693-202ENSMUST00000190758 331 ntBASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm45865-201ENSMUST00000211815 945 ntBASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Matn2-203ENSMUST00000226766 3252 ntBASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Mrpl40Q9Z2Q5 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 1057.3 ms