Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
ClcnkaQ9WUB7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm13226-201ENSMUST00000117838 404 ntBASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm14660-201ENSMUST00000119809 575 ntBASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.6□□□□□ -0.55
ClcnkaQ9WUB7 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Gm32025-201ENSMUST00000217960 307 ntBASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.59□□□□□ -0.55
ClcnkaQ9WUB7 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms