Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Gm11978-201ENSMUST00000122315 466 ntBASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.7□□□□□ -0.22
Ssr1Q9CY50 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.7□□□□□ -0.22
Ssr1Q9CY50 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Ssr1Q9CY50 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 6030407O03Rik-201ENSMUST00000189514 2094 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Gm18473-201ENSMUST00000220543 868 ntBASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ssr1Q9CY50 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Mir686-201ENSMUST00000102174 109 ntBASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Gm23984-201ENSMUST00000157139 203 ntBASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 AC125117.1-201ENSMUST00000228121 468 ntBASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.68□□□□□ -0.22
Ssr1Q9CY50 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.67□□□□□ -0.22
Ssr1Q9CY50 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms