Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Gm1848-201ENSMUST00000120711 789 ntBASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Gm13937-201ENSMUST00000121000 988 ntBASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Col25a1Q99MQ5 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col25a1Q99MQ5 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.02□□□□□ -0.32
Col25a1Q99MQ5 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Col25a1Q99MQ5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col25a1Q99MQ5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Col25a1Q99MQ5 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col25a1Q99MQ5 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Col25a1Q99MQ5 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm6447-201ENSMUST00000118905 835 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Itgb1bp1-202ENSMUST00000172834 801 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm23771-201ENSMUST00000178702 110 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm27910-201ENSMUST00000185004 107 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm3332-201ENSMUST00000189337 928 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm45598-202ENSMUST00000210719 986 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Lgi3-203ENSMUST00000226548 1001 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm8228-201ENSMUST00000189949 2192 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.02□□□□□ -0.33
Col25a1Q99MQ5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Gm12501-201ENSMUST00000119163 529 ntBASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 AC168279.1-201ENSMUST00000214611 382 ntBASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 AC166344.1-202ENSMUST00000224139 234 ntBASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Col25a1Q99MQ5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms