Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.19□□□□□ -0.46
Rnf111Q99ML9 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm8805-201ENSMUST00000117848 313 ntBASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm22331-201ENSMUST00000158066 136 ntBASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm27390-201ENSMUST00000184516 176 ntBASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm28196-201ENSMUST00000187719 640 ntBASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Gm25857-201ENSMUST00000082788 129 ntBASIC12.19□□□□□ -0.46
Rnf111Q99ML9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.19□□□□□ -0.46
Rnf111Q99ML9 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Gm24644-201ENSMUST00000157114 139 ntBASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Gm8602-201ENSMUST00000184045 607 ntBASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Gm6091-201ENSMUST00000098307 165 ntBASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Rnf111Q99ML9 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Rnf111Q99ML9 Mir686-201ENSMUST00000102174 109 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms