Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Chmp1b1Q99LU0 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Zscan30-202ENSMUST00000224144 1458 ntBASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Gm2824-203ENSMUST00000226189 1228 ntBASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Chmp1b1Q99LU0 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Chmp1b1Q99LU0 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm11425-201ENSMUST00000119608 498 ntBASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm17208-201ENSMUST00000168388 535 ntBASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm27331-201ENSMUST00000183705 60 ntBASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm37497-201ENSMUST00000195830 798 ntBASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm9396-201ENSMUST00000076703 567 ntBASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gm10012-201ENSMUST00000078252 192 ntBASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Matn2-203ENSMUST00000226766 3252 ntBASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Chmp1b1Q99LU0 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Chmp1b1Q99LU0 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms