Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Rubie-203ENSMUST00000227803 2430 ntBASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Pcdhb6Q91XZ4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb6Q91XZ4 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb6Q91XZ4 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb6Q91XZ4 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Pcdhb6Q91XZ4 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.9□□□□□ -0.35
Pcdhb6Q91XZ4 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Gm5370-201ENSMUST00000187187 574 ntBASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Gm9728-201ENSMUST00000200197 1055 ntBASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Gm19309-201ENSMUST00000218295 205 ntBASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Pcdhb6Q91XZ4 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Gm13316-201ENSMUST00000140537 691 ntBASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Gm37424-201ENSMUST00000191727 561 ntBASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Pcdhb6Q91XZ4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Pcdhb6Q91XZ4 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms