Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gm44405-201ENSMUST00000198952 126 ntBASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gm6334-201ENSMUST00000207083 228 ntBASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Rprd1aQ8VDS4 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Morn2-202ENSMUST00000227729 656 ntBASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Rprd1aQ8VDS4 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rprd1aQ8VDS4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Rprd1aQ8VDS4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
Rprd1aQ8VDS4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Rprd1aQ8VDS4 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.96□□□□□ -0.34
Rprd1aQ8VDS4 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rprd1aQ8VDS4 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Rprd1aQ8VDS4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Rprd1aQ8VDS4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm14723-201ENSMUST00000118686 215 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm13342-201ENSMUST00000121055 207 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm2991-201ENSMUST00000173338 480 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm8018-201ENSMUST00000173536 789 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm43822-201ENSMUST00000200285 476 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Cts7-204ENSMUST00000225321 1257 ntBASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Rprd1aQ8VDS4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms