Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx54Q8K4L0 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Ddx54Q8K4L0 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ddx54Q8K4L0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Gm15352-201ENSMUST00000118696 270 ntBASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Gm6722-201ENSMUST00000221586 390 ntBASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ddx54Q8K4L0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC16.33■□□□□ 0.21
Ddx54Q8K4L0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx54Q8K4L0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx54Q8K4L0 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx54Q8K4L0 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx54Q8K4L0 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx54Q8K4L0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ddx54Q8K4L0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gm11663-201ENSMUST00000117888 290 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gm15703-201ENSMUST00000120250 880 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gm15566-201ENSMUST00000121130 590 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gm9022-201ENSMUST00000182482 992 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gm42629-201ENSMUST00000199063 1102 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Il17rd-203ENSMUST00000225146 3366 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Gm43721-201ENSMUST00000199677 2313 ntBASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ddx54Q8K4L0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Gm7541-201ENSMUST00000118361 535 ntBASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Gm4862-201ENSMUST00000170405 438 ntBASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Gm18463-201ENSMUST00000207258 474 ntBASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ddx54Q8K4L0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ddx54Q8K4L0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms