Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Col23a1Q8K4G2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm8617-201ENSMUST00000118796 2222 ntBASIC15.07■□□□□ 0
Col23a1Q8K4G2 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC15.07■□□□□ 0
Col23a1Q8K4G2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Mir6407-201ENSMUST00000184510 101 ntBASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm45500-201ENSMUST00000211676 803 ntBASIC15.07■□□□□ 0
Col23a1Q8K4G2 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.07■□□□□ 0
Col23a1Q8K4G2 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Gm11422-201ENSMUST00000118925 1103 ntBASIC15.06■□□□□ 0
Col23a1Q8K4G2 Gm12856-201ENSMUST00000119471 1293 ntBASIC15.06■□□□□ 0
Col23a1Q8K4G2 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Gm26989-201ENSMUST00000182608 749 ntBASIC15.06■□□□□ 0
Col23a1Q8K4G2 Gm34908-201ENSMUST00000207222 569 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Gm23680-201ENSMUST00000083162 164 ntBASIC15.06■□□□□ 0
Col23a1Q8K4G2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Col23a1Q8K4G2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Col23a1Q8K4G2 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col23a1Q8K4G2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Col23a1Q8K4G2 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col23a1Q8K4G2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Col23a1Q8K4G2 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.05■□□□□ 0
Col23a1Q8K4G2 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col23a1Q8K4G2 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col23a1Q8K4G2 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col23a1Q8K4G2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Col23a1Q8K4G2 n-R5s84-201ENSMUST00000122591 109 ntBASIC15.05■□□□□ -0
Col23a1Q8K4G2 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Gm18460-201ENSMUST00000208088 464 ntBASIC15.05■□□□□ -0
Col23a1Q8K4G2 Gm45410-201ENSMUST00000211331 1093 ntBASIC15.05■□□□□ -0
Col23a1Q8K4G2 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.05■□□□□ -0
Col23a1Q8K4G2 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Col23a1Q8K4G2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms