Protein–RNA interactions for Protein: Q8K2F3

Depp1, Protein DEPP1, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depp1Q8K2F3 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gm22331-201ENSMUST00000158066 136 ntBASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gm43051-201ENSMUST00000201096 2678 ntBASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Retreg1-206ENSMUST00000228306 1430 ntBASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Depp1Q8K2F3 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm27331-201ENSMUST00000183705 60 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm27892-201ENSMUST00000185017 106 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm17794-201ENSMUST00000220252 955 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm19163-201ENSMUST00000223313 780 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm4735-201ENSMUST00000138679 1302 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm5855-201ENSMUST00000200240 1305 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Gm43365-201ENSMUST00000196522 2106 ntBASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Depp1Q8K2F3 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Gm15897-201ENSMUST00000117770 1486 ntBASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Gm15703-201ENSMUST00000120250 880 ntBASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC10.71□□□□□ -0.69
Depp1Q8K2F3 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms