Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 AC153954.1-201ENSMUST00000216959 255 ntBASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtn4rl1Q8K0S5 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm14760-201ENSMUST00000121831 999 ntBASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm43916-201ENSMUST00000205062 967 ntBASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm4607-201ENSMUST00000206649 577 ntBASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 AC140293.1-201ENSMUST00000225626 1247 ntBASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm11509-201ENSMUST00000117358 325 ntBASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm13888-201ENSMUST00000119148 422 ntBASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rtn4rl1Q8K0S5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms