Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Gm18307-201ENSMUST00000206864 949 ntBASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Lysmd4Q8CC84 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Gm24231-201ENSMUST00000104315 133 ntBASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Mir7654-201ENSMUST00000185082 70 ntBASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 AC160405.1-201ENSMUST00000218207 1545 ntBASIC11.25□□□□□ -0.61
Lysmd4Q8CC84 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm15429-201ENSMUST00000151268 798 ntBASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm23363-201ENSMUST00000175024 79 ntBASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm28631-201ENSMUST00000190740 334 ntBASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm8099-201ENSMUST00000200510 742 ntBASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Lysmd4Q8CC84 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms