Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Alx1Q8C8B0 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Alx1Q8C8B0 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Gm25668-201ENSMUST00000157700 129 ntBASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Gm17376-201ENSMUST00000166016 84 ntBASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 AA914427-201ENSMUST00000193194 1166 ntBASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Gm38317-201ENSMUST00000195564 343 ntBASIC14.62□□□□□ -0.07
Alx1Q8C8B0 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Alx1Q8C8B0 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Gm8038-201ENSMUST00000164674 2044 ntBASIC14.61□□□□□ -0.07
Alx1Q8C8B0 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 AC126444.1-201ENSMUST00000225938 1768 ntBASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Gm27046-201ENSMUST00000182160 463 ntBASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Gm9996-201ENSMUST00000070359 913 ntBASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Alx1Q8C8B0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Gm24830-201ENSMUST00000102024 166 ntBASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Gm26232-201ENSMUST00000083360 166 ntBASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Alx1Q8C8B0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Gm18626-201ENSMUST00000221512 1409 ntBASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Alx1Q8C8B0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms