Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ska3Q8C263 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska3Q8C263 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ska3Q8C263 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.85□□□□□ -0.51
Ska3Q8C263 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska3Q8C263 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ska3Q8C263 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Gm13392-201ENSMUST00000117708 150 ntBASIC11.84□□□□□ -0.51
Ska3Q8C263 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ska3Q8C263 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Ska3Q8C263 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ska3Q8C263 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.83□□□□□ -0.52
Ska3Q8C263 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ska3Q8C263 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ska3Q8C263 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.83□□□□□ -0.52
Ska3Q8C263 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ska3Q8C263 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Gm6023-201ENSMUST00000118217 606 ntBASIC11.83□□□□□ -0.52
Ska3Q8C263 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.83□□□□□ -0.52
Ska3Q8C263 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Ska3Q8C263 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ska3Q8C263 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.83□□□□□ -0.52
Ska3Q8C263 Gm42627-201ENSMUST00000197347 224 ntBASIC11.83□□□□□ -0.52
Ska3Q8C263 Gm45880-201ENSMUST00000213041 853 ntBASIC11.83□□□□□ -0.52
Ska3Q8C263 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.83□□□□□ -0.52
Ska3Q8C263 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.83□□□□□ -0.52
Ska3Q8C263 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.83□□□□□ -0.52
Ska3Q8C263 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.83□□□□□ -0.52
Ska3Q8C263 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.83□□□□□ -0.52
Ska3Q8C263 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ska3Q8C263 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ska3Q8C263 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska3Q8C263 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska3Q8C263 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska3Q8C263 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ska3Q8C263 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.82□□□□□ -0.52
Ska3Q8C263 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ska3Q8C263 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms