Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Gm2420-201ENSMUST00000119864 2149 ntBASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.77□□□□□ -0.52
Vps9d1Q8C190 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Gm12928-201ENSMUST00000117115 573 ntBASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Ighv8-10-201ENSMUST00000199579 358 ntBASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Gm18473-201ENSMUST00000220543 868 ntBASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Vps9d1Q8C190 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gm6152-201ENSMUST00000151704 340 ntBASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Mir7085-201ENSMUST00000184353 66 ntBASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gm27892-201ENSMUST00000185017 106 ntBASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gm42929-201ENSMUST00000198374 1286 ntBASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Vps9d1Q8C190 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.75□□□□□ -0.53
Vps9d1Q8C190 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms