Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm13392-201ENSMUST00000117708 150 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm16296-201ENSMUST00000159905 325 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm38002-201ENSMUST00000193255 180 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.75□□□□□ -0.53
Cpne1Q8C166 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Cpne1Q8C166 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC11.74□□□□□ -0.53
Cpne1Q8C166 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Gm5850-201ENSMUST00000192923 1206 ntBASIC11.74□□□□□ -0.53
Cpne1Q8C166 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Gm5781-201ENSMUST00000219792 443 ntBASIC11.74□□□□□ -0.53
Cpne1Q8C166 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Gm9823-201ENSMUST00000051212 327 ntBASIC11.74□□□□□ -0.53
Cpne1Q8C166 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.74□□□□□ -0.53
Cpne1Q8C166 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.74□□□□□ -0.53
Cpne1Q8C166 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.74□□□□□ -0.53
Cpne1Q8C166 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cpne1Q8C166 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 86 ms