Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trim47Q8C0E3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Gm12314-201ENSMUST00000118104 538 ntBASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Gm18304-201ENSMUST00000189162 546 ntBASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Gm4857-201ENSMUST00000192718 785 ntBASIC13.93□□□□□ -0.18
Trim47Q8C0E3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 CT009713.10-202ENSMUST00000225734 696 ntBASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.93□□□□□ -0.18
Trim47Q8C0E3 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm14760-201ENSMUST00000121831 999 ntBASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm12749-201ENSMUST00000122138 1159 ntBASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm24845-201ENSMUST00000158034 109 ntBASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm27023-201ENSMUST00000182372 285 ntBASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm42937-201ENSMUST00000197360 752 ntBASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim47Q8C0E3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Gm9519-201ENSMUST00000206108 1337 ntBASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Gm44942-201ENSMUST00000096093 2072 ntBASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Gm11930-201ENSMUST00000117788 190 ntBASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.91□□□□□ -0.18
Trim47Q8C0E3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Gm26083-201ENSMUST00000157904 193 ntBASIC13.91□□□□□ -0.18
Trim47Q8C0E3 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms