Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Gm5904-201ENSMUST00000210286 865 ntBASIC12.44□□□□□ -0.42
Ubp1Q811S7 Gm19309-201ENSMUST00000218295 205 ntBASIC12.44□□□□□ -0.42
Ubp1Q811S7 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.44□□□□□ -0.42
Ubp1Q811S7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.44□□□□□ -0.42
Ubp1Q811S7 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Ubp1Q811S7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm42651-201ENSMUST00000199851 1339 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm6023-201ENSMUST00000118217 606 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm42693-201ENSMUST00000196779 631 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm43133-201ENSMUST00000197472 463 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm43630-201ENSMUST00000201550 776 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm18054-201ENSMUST00000207539 555 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm5781-201ENSMUST00000219792 443 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.43□□□□□ -0.42
Ubp1Q811S7 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Ubp1Q811S7 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.42□□□□□ -0.42
Ubp1Q811S7 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.42□□□□□ -0.42
Ubp1Q811S7 AC132317.1-201ENSMUST00000227227 962 ntBASIC12.42□□□□□ -0.42
Ubp1Q811S7 Gm24526-201ENSMUST00000082921 158 ntBASIC12.42□□□□□ -0.42
Ubp1Q811S7 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ubp1Q811S7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms