Protein–RNA interactions for Protein: Q7TNH6

Nphp3, Nephrocystin-3, mousemouse

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp3Q7TNH6 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Gm4864-201ENSMUST00000219894 1461 ntBASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nphp3Q7TNH6 Gm6015-201ENSMUST00000217493 1586 ntBASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Gm24231-201ENSMUST00000104315 133 ntBASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Gm13570-201ENSMUST00000140763 309 ntBASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Gm25668-201ENSMUST00000157700 129 ntBASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 AA914427-201ENSMUST00000193194 1166 ntBASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Gm18615-201ENSMUST00000222919 1031 ntBASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 AC159195.1-201ENSMUST00000225867 2086 ntBASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nphp3Q7TNH6 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm15236-201ENSMUST00000117309 379 ntBASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm11930-201ENSMUST00000117788 190 ntBASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm15547-201ENSMUST00000122152 333 ntBASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm23119-201ENSMUST00000158610 140 ntBASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm27023-201ENSMUST00000182372 285 ntBASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm38317-201ENSMUST00000195564 343 ntBASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm10076-201ENSMUST00000073238 384 ntBASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 AC154262.2-202ENSMUST00000225158 1331 ntBASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Nphp3Q7TNH6 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gm15808-201ENSMUST00000119046 604 ntBASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gm42937-201ENSMUST00000197360 752 ntBASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gm26035-201ENSMUST00000083065 308 ntBASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC15.22■□□□□ 0.03
Nphp3Q7TNH6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms