Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm11509-201ENSMUST00000117358 325 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Mup-ps26-201ENSMUST00000121751 202 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm8343-201ENSMUST00000182705 994 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm19287-201ENSMUST00000203190 358 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm4157-201ENSMUST00000211647 679 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Gm43858-201ENSMUST00000199418 1778 ntBASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Ddx55Q6ZPL9 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Gm9129-201ENSMUST00000218173 1689 ntBASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Selenot-ps-201ENSMUST00000119098 593 ntBASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Gm9463-201ENSMUST00000206707 601 ntBASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Ddx55Q6ZPL9 Gm14150-201ENSMUST00000122404 1354 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm12857-201ENSMUST00000117678 592 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm13809-201ENSMUST00000117921 597 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Mir6958-201ENSMUST00000184207 73 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm2965-201ENSMUST00000198365 343 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm45398-201ENSMUST00000210561 165 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 CT571245.2-201ENSMUST00000218421 305 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Gm18974-201ENSMUST00000221478 1031 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 CT030637.1-201ENSMUST00000228016 669 ntBASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ddx55Q6ZPL9 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms