Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Smarcd1Q61466 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Gm44207-201ENSMUST00000204568 1424 ntBASIC13.07□□□□□ -0.32
Smarcd1Q61466 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Gm14109-201ENSMUST00000118814 309 ntBASIC13.07□□□□□ -0.32
Smarcd1Q61466 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.07□□□□□ -0.32
Smarcd1Q61466 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.07□□□□□ -0.32
Smarcd1Q61466 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Smarcd1Q61466 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm13097-201ENSMUST00000210722 397 ntBASIC13.06□□□□□ -0.32
Smarcd1Q61466 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm24136-201ENSMUST00000083374 165 ntBASIC13.06□□□□□ -0.32
Smarcd1Q61466 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.06□□□□□ -0.32
Smarcd1Q61466 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.06□□□□□ -0.32
Smarcd1Q61466 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Smarcd1Q61466 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm18227-201ENSMUST00000211082 1468 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm15276-201ENSMUST00000145953 498 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm23119-201ENSMUST00000158610 140 ntBASIC13.05□□□□□ -0.32
Smarcd1Q61466 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Smarcd1Q61466 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms