Protein–RNA interactions for Protein: Q3LRV9

Treml4, Trem-like transcript 4 protein, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml4Q3LRV9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Gm11331-201ENSMUST00000119764 288 ntBASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Gm25732-201ENSMUST00000175168 60 ntBASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Map1b-203ENSMUST00000223725 2669 ntBASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Treml4Q3LRV9 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12616-201ENSMUST00000118594 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm8908-201ENSMUST00000121633 1024 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12624-201ENSMUST00000177615 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12621-201ENSMUST00000177760 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12615-201ENSMUST00000177970 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12622-201ENSMUST00000177975 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12627-201ENSMUST00000178412 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12625-201ENSMUST00000179122 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12614-201ENSMUST00000179586 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm12613-201ENSMUST00000180323 382 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm18916-201ENSMUST00000198264 1246 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm8385-201ENSMUST00000058999 643 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Treml4Q3LRV9 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.84□□□□□ -0.51
Treml4Q3LRV9 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Treml4Q3LRV9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms