Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Col19a1Q0VF58 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm26286-201ENSMUST00000104166 134 ntBASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm12783-201ENSMUST00000121425 397 ntBASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm23119-201ENSMUST00000158610 140 ntBASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm42629-201ENSMUST00000199063 1102 ntBASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm9797-202ENSMUST00000218003 294 ntBASIC13.31□□□□□ -0.28
Col19a1Q0VF58 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Col19a1Q0VF58 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Rpl4-201ENSMUST00000034966 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Gm19680-201ENSMUST00000095050 1513 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Gm13394-201ENSMUST00000121658 1000 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Gm18706-201ENSMUST00000210053 1066 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Gm45500-201ENSMUST00000211676 803 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 AC153961.1-201ENSMUST00000217760 385 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 AC171277.1-201ENSMUST00000216902 1441 ntBASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Col19a1Q0VF58 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col19a1Q0VF58 Gm15784-201ENSMUST00000120260 1462 ntBASIC13.29□□□□□ -0.28
Col19a1Q0VF58 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col19a1Q0VF58 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col19a1Q0VF58 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Col19a1Q0VF58 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms