Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm15595-201ENSMUST00000120840 961 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm12196-201ENSMUST00000120954 262 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.54□□□□□ -0.4
Col9a1Q05722 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm29410-201ENSMUST00000188383 694 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm4870-201ENSMUST00000198525 1251 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm43969-201ENSMUST00000204833 535 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm7183-201ENSMUST00000213870 1005 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.54□□□□□ -0.4
Col9a1Q05722 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col9a1Q05722 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm5805-201ENSMUST00000072779 456 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Col9a1Q05722 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm37728-201ENSMUST00000195025 2292 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Gm45885-202ENSMUST00000211520 1383 ntBASIC12.54□□□□□ -0.4
Col9a1Q05722 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Col9a1Q05722 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.53□□□□□ -0.4
Col9a1Q05722 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm14481-201ENSMUST00000117178 629 ntBASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm12712-201ENSMUST00000120676 801 ntBASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm11655-201ENSMUST00000153899 765 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 AC159886.1-201ENSMUST00000217099 1091 ntBASIC12.53□□□□□ -0.4
Col9a1Q05722 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Tex46-201ENSMUST00000046647 683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.53□□□□□ -0.4
Col9a1Q05722 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.53□□□□□ -0.4
Col9a1Q05722 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Col9a1Q05722 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a1Q05722 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a1Q05722 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a1Q05722 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a1Q05722 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
Col9a1Q05722 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a1Q05722 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Col9a1Q05722 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a1Q05722 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Col9a1Q05722 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Col9a1Q05722 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms