Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Gabpb1Q00420 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm16379-201ENSMUST00000161469 348 ntBASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm8018-201ENSMUST00000173536 789 ntBASIC12.75□□□□□ -0.37
Gabpb1Q00420 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm8762-201ENSMUST00000193486 339 ntBASIC12.75□□□□□ -0.37
Gabpb1Q00420 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm5904-201ENSMUST00000210286 865 ntBASIC12.75□□□□□ -0.37
Gabpb1Q00420 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm25857-201ENSMUST00000082788 129 ntBASIC12.75□□□□□ -0.37
Gabpb1Q00420 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.75□□□□□ -0.37
Gabpb1Q00420 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Gabpb1Q00420 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Daam2-202ENSMUST00000224595 1926 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm5053-201ENSMUST00000208361 1678 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm11425-201ENSMUST00000119608 498 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm27731-201ENSMUST00000185192 107 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm18062-201ENSMUST00000208020 547 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm18055-201ENSMUST00000208254 547 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm9396-201ENSMUST00000076703 567 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Gm24136-201ENSMUST00000083374 165 ntBASIC12.74□□□□□ -0.37
Gabpb1Q00420 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Gabpb1Q00420 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms