Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm38042-201ENSMUST00000191614 5208 ntBASIC11.61□□□□□ -0.55
Cacna1aP97445 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm12628-201ENSMUST00000122193 382 ntBASIC11.61□□□□□ -0.55
Cacna1aP97445 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm45598-202ENSMUST00000210719 986 ntBASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm17827-201ENSMUST00000211825 742 ntBASIC11.61□□□□□ -0.55
Cacna1aP97445 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm11941-201ENSMUST00000119904 610 ntBASIC11.61□□□□□ -0.55
Cacna1aP97445 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm23153-201ENSMUST00000175323 313 ntBASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm19931-201ENSMUST00000198920 368 ntBASIC11.61□□□□□ -0.55
Cacna1aP97445 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cacna1aP97445 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
Cacna1aP97445 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cacna1aP97445 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC11.6□□□□□ -0.55
Cacna1aP97445 Gm13315-201ENSMUST00000120376 991 ntBASIC11.6□□□□□ -0.55
Cacna1aP97445 Mir1901-201ENSMUST00000122616 78 ntBASIC11.6□□□□□ -0.55
Cacna1aP97445 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.6□□□□□ -0.55
Cacna1aP97445 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cacna1aP97445 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Cacna1aP97445 Gm14999-201ENSMUST00000121039 624 ntBASIC11.6□□□□□ -0.55
Cacna1aP97445 Mir7221-201ENSMUST00000184009 72 ntBASIC11.6□□□□□ -0.55
Cacna1aP97445 Gm37028-201ENSMUST00000194276 107 ntBASIC11.6□□□□□ -0.55
Cacna1aP97445 Gm3793-201ENSMUST00000204973 672 ntBASIC11.6□□□□□ -0.55
Cacna1aP97445 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC11.6□□□□□ -0.55
Cacna1aP97445 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Gm10076-201ENSMUST00000073238 384 ntBASIC11.6□□□□□ -0.55
Cacna1aP97445 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cacna1aP97445 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cacna1aP97445 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.59□□□□□ -0.55
Cacna1aP97445 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cacna1aP97445 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cacna1aP97445 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.59□□□□□ -0.55
Cacna1aP97445 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cacna1aP97445 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Cacna1aP97445 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cacna1aP97445 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.59□□□□□ -0.55
Cacna1aP97445 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.59□□□□□ -0.55
Cacna1aP97445 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cacna1aP97445 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC11.59□□□□□ -0.55
Cacna1aP97445 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms