Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim43cP86449 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Trim43cP86449 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.66□□□□□ -0.22
Trim43cP86449 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.66□□□□□ -0.22
Trim43cP86449 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Trim43cP86449 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Trim43cP86449 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Trim43cP86449 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC13.66□□□□□ -0.22
Trim43cP86449 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.65□□□□□ -0.22
Trim43cP86449 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
Trim43cP86449 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim43cP86449 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Trim43cP86449 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim43cP86449 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim43cP86449 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Trim43cP86449 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.65□□□□□ -0.22
Trim43cP86449 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.65□□□□□ -0.22
Trim43cP86449 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Trim43cP86449 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Trim43cP86449 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trim43cP86449 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim43cP86449 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.23
Trim43cP86449 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Trim43cP86449 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.64□□□□□ -0.23
Trim43cP86449 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Trim43cP86449 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.64□□□□□ -0.23
Trim43cP86449 Mir1247-201ENSMUST00000116706 82 ntBASIC13.64□□□□□ -0.23
Trim43cP86449 Gm12058-201ENSMUST00000118614 437 ntBASIC13.64□□□□□ -0.23
Trim43cP86449 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.64□□□□□ -0.23
Trim43cP86449 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.64□□□□□ -0.23
Trim43cP86449 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim43cP86449 Gm42937-201ENSMUST00000197360 752 ntBASIC13.64□□□□□ -0.23
Trim43cP86449 Gm45925-201ENSMUST00000218882 744 ntBASIC13.64□□□□□ -0.23
Trim43cP86449 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Trim43cP86449 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trim43cP86449 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trim43cP86449 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trim43cP86449 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trim43cP86449 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trim43cP86449 Pck2-205ENSMUST00000226352 2784 ntBASIC13.63□□□□□ -0.23
Trim43cP86449 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Trim43cP86449 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Trim43cP86449 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trim43cP86449 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trim43cP86449 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms