Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.85■□□□□ 0.29
Nphp4P59240 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nphp4P59240 Gm14724-201ENSMUST00000118400 537 ntBASIC16.85■□□□□ 0.29
Nphp4P59240 Gm13408-201ENSMUST00000119822 798 ntBASIC16.85■□□□□ 0.29
Nphp4P59240 Gm13935-201ENSMUST00000121859 798 ntBASIC16.85■□□□□ 0.29
Nphp4P59240 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
Nphp4P59240 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Nphp4P59240 Gm9211-201ENSMUST00000182882 975 ntBASIC16.85■□□□□ 0.29
Nphp4P59240 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC16.85■□□□□ 0.29
Nphp4P59240 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC16.85■□□□□ 0.29
Nphp4P59240 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nphp4P59240 Gm42682-201ENSMUST00000198349 1265 ntBASIC16.85■□□□□ 0.29
Nphp4P59240 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC16.85■□□□□ 0.29
Nphp4P59240 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nphp4P59240 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nphp4P59240 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nphp4P59240 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nphp4P59240 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nphp4P59240 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Nphp4P59240 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC16.85■□□□□ 0.29
Nphp4P59240 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Acot6-202ENSMUST00000222921 3622 ntBASIC16.84■□□□□ 0.29
Nphp4P59240 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
Nphp4P59240 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Gm9062-201ENSMUST00000117712 727 ntBASIC16.84■□□□□ 0.29
Nphp4P59240 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC16.84■□□□□ 0.29
Nphp4P59240 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 Gm42629-201ENSMUST00000199063 1102 ntBASIC16.84■□□□□ 0.29
Nphp4P59240 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Gm45770-201ENSMUST00000212105 616 ntBASIC16.84■□□□□ 0.29
Nphp4P59240 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC16.84■□□□□ 0.29
Nphp4P59240 AC154680.1-201ENSMUST00000224376 859 ntBASIC16.84■□□□□ 0.29
Nphp4P59240 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC16.84■□□□□ 0.29
Nphp4P59240 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Nphp4P59240 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nphp4P59240 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nphp4P59240 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nphp4P59240 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nphp4P59240 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nphp4P59240 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nphp4P59240 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Nphp4P59240 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Nphp4P59240 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Nphp4P59240 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Gm17931-201ENSMUST00000208132 634 ntBASIC16.83■□□□□ 0.28
Nphp4P59240 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.83■□□□□ 0.28
Nphp4P59240 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC16.83■□□□□ 0.28
Nphp4P59240 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC16.83■□□□□ 0.28
Nphp4P59240 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC16.83■□□□□ 0.28
Nphp4P59240 Gm6781-201ENSMUST00000038304 1242 ntBASIC16.83■□□□□ 0.28
Nphp4P59240 Gm5705-201ENSMUST00000066241 711 ntBASIC16.83■□□□□ 0.28
Nphp4P59240 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Gm5780-201ENSMUST00000217774 1834 ntBASIC16.83■□□□□ 0.28
Nphp4P59240 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Nphp4P59240 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
Nphp4P59240 Gm37437-201ENSMUST00000194451 1937 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Nphp4P59240 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Gm10152-201ENSMUST00000193475 1344 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC16.82■□□□□ 0.28
Nphp4P59240 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC16.82■□□□□ 0.28
Nphp4P59240 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC16.82■□□□□ 0.28
Nphp4P59240 Gm23085-201ENSMUST00000157849 293 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Gm24514-201ENSMUST00000174961 285 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC16.82■□□□□ 0.28
Nphp4P59240 Gm5733-201ENSMUST00000190232 939 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC16.82■□□□□ 0.28
Nphp4P59240 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 AC151275.1-201ENSMUST00000224870 585 ntBASIC16.82■□□□□ 0.28
Nphp4P59240 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nphp4P59240 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Nphp4P59240 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms