Protein–RNA interactions for Protein: P54775

Psmc4, 26S proteasome regulatory subunit 6B, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmc4P54775 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Gm37133-201ENSMUST00000192705 1922 ntBASIC14.29□□□□□ -0.12
Psmc4P54775 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC14.29□□□□□ -0.12
Psmc4P54775 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Psmc4P54775 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Psmc4P54775 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Psmc4P54775 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC14.29□□□□□ -0.12
Psmc4P54775 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC14.28□□□□□ -0.12
Psmc4P54775 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Psmc4P54775 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Gm13045-201ENSMUST00000119019 712 ntBASIC14.28□□□□□ -0.12
Psmc4P54775 Gm13888-201ENSMUST00000119148 422 ntBASIC14.28□□□□□ -0.12
Psmc4P54775 Gm6039-201ENSMUST00000121667 1250 ntBASIC14.28□□□□□ -0.12
Psmc4P54775 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Psmc4P54775 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.28□□□□□ -0.12
Psmc4P54775 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
Psmc4P54775 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Psmc4P54775 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Psmc4P54775 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Psmc4P54775 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Psmc4P54775 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Psmc4P54775 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
Psmc4P54775 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Psmc4P54775 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Psmc4P54775 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Gm12165-201ENSMUST00000117047 342 ntBASIC14.27□□□□□ -0.13
Psmc4P54775 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.27□□□□□ -0.13
Psmc4P54775 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Gm12291-201ENSMUST00000121627 311 ntBASIC14.27□□□□□ -0.13
Psmc4P54775 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Gm28071-201ENSMUST00000190355 478 ntBASIC14.27□□□□□ -0.13
Psmc4P54775 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.27□□□□□ -0.13
Psmc4P54775 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Gm19187-201ENSMUST00000206781 892 ntBASIC14.27□□□□□ -0.13
Psmc4P54775 Gm10752-201ENSMUST00000218348 729 ntBASIC14.27□□□□□ -0.13
Psmc4P54775 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Psmc4P54775 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.27□□□□□ -0.13
Psmc4P54775 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Psmc4P54775 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Psmc4P54775 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC14.27□□□□□ -0.13
Psmc4P54775 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Psmc4P54775 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Psmc4P54775 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Psmc4P54775 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Psmc4P54775 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms