Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC15.83■□□□□ 0.12
Msh6P54276 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Msh6P54276 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.83■□□□□ 0.12
Msh6P54276 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.82■□□□□ 0.12
Msh6P54276 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Msh6P54276 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Gm15432-201ENSMUST00000121106 195 ntBASIC15.82■□□□□ 0.12
Msh6P54276 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Msh6P54276 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.81■□□□□ 0.12
Msh6P54276 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.81■□□□□ 0.12
Msh6P54276 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Msh6P54276 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.81■□□□□ 0.12
Msh6P54276 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC15.81■□□□□ 0.12
Msh6P54276 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Msh6P54276 Gm10051-201ENSMUST00000145209 414 ntBASIC15.81■□□□□ 0.12
Msh6P54276 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC15.81■□□□□ 0.12
Msh6P54276 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.81■□□□□ 0.12
Msh6P54276 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.81■□□□□ 0.12
Msh6P54276 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Msh6P54276 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC15.81■□□□□ 0.12
Msh6P54276 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Msh6P54276 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Msh6P54276 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Msh6P54276 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Gm43721-201ENSMUST00000199677 2313 ntBASIC15.8■□□□□ 0.12
Msh6P54276 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC15.8■□□□□ 0.12
Msh6P54276 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 H2-Q3-201ENSMUST00000172583 608 ntBASIC15.8■□□□□ 0.12
Msh6P54276 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh6P54276 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC15.8■□□□□ 0.12
Msh6P54276 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.8■□□□□ 0.12
Msh6P54276 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
Msh6P54276 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Gm9947-201ENSMUST00000067599 2920 ntBASIC15.8■□□□□ 0.12
Msh6P54276 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Msh6P54276 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Msh6P54276 Gm13812-201ENSMUST00000118061 1347 ntBASIC15.79■□□□□ 0.12
Msh6P54276 Gm13810-201ENSMUST00000118584 1347 ntBASIC15.79■□□□□ 0.12
Msh6P54276 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Msh6P54276 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC15.79■□□□□ 0.12
Msh6P54276 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms