Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Gm22920-201ENSMUST00000102175 109 ntBASIC13.84□□□□□ -0.19
Brca1P48754 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.84□□□□□ -0.19
Brca1P48754 Gm15566-201ENSMUST00000121130 590 ntBASIC13.84□□□□□ -0.19
Brca1P48754 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Brca1P48754 Gm42657-201ENSMUST00000201746 211 ntBASIC13.84□□□□□ -0.19
Brca1P48754 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC13.84□□□□□ -0.19
Brca1P48754 Gm19640-201ENSMUST00000214849 464 ntBASIC13.84□□□□□ -0.19
Brca1P48754 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Brca1P48754 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.84□□□□□ -0.19
Brca1P48754 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Brca1P48754 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.84□□□□□ -0.19
Brca1P48754 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Brca1P48754 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Brca1P48754 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.83□□□□□ -0.2
Brca1P48754 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Brca1P48754 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC13.83□□□□□ -0.2
Brca1P48754 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.83□□□□□ -0.2
Brca1P48754 Gm24844-201ENSMUST00000158679 127 ntBASIC13.83□□□□□ -0.2
Brca1P48754 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC13.83□□□□□ -0.2
Brca1P48754 Gm18059-201ENSMUST00000208073 580 ntBASIC13.83□□□□□ -0.2
Brca1P48754 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm43807-201ENSMUST00000200678 1781 ntBASIC13.83□□□□□ -0.2
Brca1P48754 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Brca1P48754 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Brca1P48754 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.83□□□□□ -0.2
Brca1P48754 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13.83□□□□□ -0.2
Brca1P48754 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC13.83□□□□□ -0.2
Brca1P48754 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm18041-201ENSMUST00000218210 618 ntBASIC13.83□□□□□ -0.2
Brca1P48754 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.83□□□□□ -0.2
Brca1P48754 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Gm25201-201ENSMUST00000083093 170 ntBASIC13.83□□□□□ -0.2
Brca1P48754 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Brca1P48754 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.82□□□□□ -0.2
Brca1P48754 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Gm8038-201ENSMUST00000164674 2044 ntBASIC13.82□□□□□ -0.2
Brca1P48754 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.82□□□□□ -0.2
Brca1P48754 Gm22442-201ENSMUST00000157256 144 ntBASIC13.82□□□□□ -0.2
Brca1P48754 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.82□□□□□ -0.2
Brca1P48754 Gm44421-201ENSMUST00000205064 1221 ntBASIC13.82□□□□□ -0.2
Brca1P48754 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Brca1P48754 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC13.82□□□□□ -0.2
Brca1P48754 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.82□□□□□ -0.2
Brca1P48754 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.82□□□□□ -0.2
Brca1P48754 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.82□□□□□ -0.2
Brca1P48754 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Brca1P48754 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms