Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Upk2P38575 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.01□□□□□ -0.65
Upk2P38575 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Gm8565-201ENSMUST00000183259 1014 ntBASIC11.01□□□□□ -0.65
Upk2P38575 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.01□□□□□ -0.65
Upk2P38575 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Upk2P38575 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Gm45925-201ENSMUST00000218882 744 ntBASIC11.01□□□□□ -0.65
Upk2P38575 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11.01□□□□□ -0.65
Upk2P38575 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 AC117194.1-201ENSMUST00000224847 3002 ntBASIC11.01□□□□□ -0.65
Upk2P38575 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Upk2P38575 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Upk2P38575 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Upk2P38575 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Upk2P38575 Gm44241-201ENSMUST00000203230 1662 ntBASIC11.01□□□□□ -0.65
Upk2P38575 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Dctn4-202ENSMUST00000223590 1530 ntBASIC11□□□□□ -0.65
Upk2P38575 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Gm11597-201ENSMUST00000121423 964 ntBASIC11□□□□□ -0.65
Upk2P38575 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11□□□□□ -0.65
Upk2P38575 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11□□□□□ -0.65
Upk2P38575 Gm24548-201ENSMUST00000158650 108 ntBASIC11□□□□□ -0.65
Upk2P38575 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Gm9022-201ENSMUST00000182482 992 ntBASIC11□□□□□ -0.65
Upk2P38575 Gm44405-201ENSMUST00000198952 126 ntBASIC11□□□□□ -0.65
Upk2P38575 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC11□□□□□ -0.65
Upk2P38575 Gm24136-201ENSMUST00000083374 165 ntBASIC11□□□□□ -0.65
Upk2P38575 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Gm5053-201ENSMUST00000208361 1678 ntBASIC11□□□□□ -0.65
Upk2P38575 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11□□□□□ -0.65
Upk2P38575 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Upk2P38575 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11□□□□□ -0.65
Upk2P38575 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 AC153366.2-201ENSMUST00000219461 1984 ntBASIC10.99□□□□□ -0.65
Upk2P38575 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Upk2P38575 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Upk2P38575 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC10.99□□□□□ -0.65
Upk2P38575 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms