Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.87□□□□□ -0.35
Mmp13P33435 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.87□□□□□ -0.35
Mmp13P33435 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Mmp13P33435 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Mmp13P33435 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Mmp13P33435 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Mmp13P33435 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.86□□□□□ -0.35
Mmp13P33435 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC12.86□□□□□ -0.35
Mmp13P33435 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Mmp13P33435 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.86□□□□□ -0.35
Mmp13P33435 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.86□□□□□ -0.35
Mmp13P33435 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Gm28693-202ENSMUST00000190758 331 ntBASIC12.86□□□□□ -0.35
Mmp13P33435 AY702102-202ENSMUST00000194651 1173 ntBASIC12.86□□□□□ -0.35
Mmp13P33435 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.86□□□□□ -0.35
Mmp13P33435 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.86□□□□□ -0.35
Mmp13P33435 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.86□□□□□ -0.35
Mmp13P33435 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Mir339-201ENSMUST00000083659 96 ntBASIC12.86□□□□□ -0.35
Mmp13P33435 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.86□□□□□ -0.35
Mmp13P33435 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Mmp13P33435 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Mmp13P33435 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp13P33435 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Mmp13P33435 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC12.85□□□□□ -0.35
Mmp13P33435 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.85□□□□□ -0.35
Mmp13P33435 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.85□□□□□ -0.35
Mmp13P33435 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp13P33435 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Gm9630-201ENSMUST00000178304 885 ntBASIC12.85□□□□□ -0.35
Mmp13P33435 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.85□□□□□ -0.35
Mmp13P33435 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.85□□□□□ -0.35
Mmp13P33435 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Mmp13P33435 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.85□□□□□ -0.35
Mmp13P33435 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 AC157950.1-201ENSMUST00000217561 2168 ntBASIC12.85□□□□□ -0.35
Mmp13P33435 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Mmp13P33435 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Mmp13P33435 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.84□□□□□ -0.35
Mmp13P33435 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12.84□□□□□ -0.35
Mmp13P33435 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Mmp13P33435 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms