Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.96□□□□□ -0.34
Hoxd8P23463 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.96□□□□□ -0.34
Hoxd8P23463 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Hoxd8P23463 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Hoxd8P23463 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Hoxd8P23463 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.96□□□□□ -0.34
Hoxd8P23463 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.96□□□□□ -0.34
Hoxd8P23463 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Rubie-203ENSMUST00000227803 2430 ntBASIC12.96□□□□□ -0.34
Hoxd8P23463 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Hoxd8P23463 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm42651-201ENSMUST00000199851 1339 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm9062-201ENSMUST00000117712 727 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm13045-201ENSMUST00000119019 712 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.95□□□□□ -0.34
Hoxd8P23463 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm25951-201ENSMUST00000175330 64 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gm17827-201ENSMUST00000211825 742 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 AC155266.1-201ENSMUST00000220762 904 ntBASIC12.95□□□□□ -0.34
Hoxd8P23463 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Hoxd8P23463 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Hoxd8P23463 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxd8P23463 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Hoxd8P23463 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm13035-201ENSMUST00000117496 342 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm11941-201ENSMUST00000119904 610 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC12.94□□□□□ -0.34
Hoxd8P23463 Mir1943-201ENSMUST00000158276 73 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC12.94□□□□□ -0.34
Hoxd8P23463 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Mir7677-201ENSMUST00000184226 67 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm28745-201ENSMUST00000190069 305 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm18711-201ENSMUST00000199341 750 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.94□□□□□ -0.34
Hoxd8P23463 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
Hoxd8P23463 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 AC106830.1-201ENSMUST00000228032 1003 ntBASIC12.94□□□□□ -0.34
Hoxd8P23463 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Hoxd8P23463 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms