Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Gm23270-201ENSMUST00000104055 131 ntBASIC12.06□□□□□ -0.48
Cntn1P12960 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.06□□□□□ -0.48
Cntn1P12960 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Gm25043-201ENSMUST00000158604 212 ntBASIC12.06□□□□□ -0.48
Cntn1P12960 Gm37201-201ENSMUST00000191845 523 ntBASIC12.06□□□□□ -0.48
Cntn1P12960 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Cntn1P12960 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.06□□□□□ -0.48
Cntn1P12960 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.06□□□□□ -0.48
Cntn1P12960 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Cntn1P12960 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.06□□□□□ -0.48
Cntn1P12960 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.05□□□□□ -0.48
Cntn1P12960 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Cntn1P12960 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.05□□□□□ -0.48
Cntn1P12960 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
Cntn1P12960 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.05□□□□□ -0.48
Cntn1P12960 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.05□□□□□ -0.48
Cntn1P12960 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cntn1P12960 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Cntn1P12960 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.05□□□□□ -0.48
Cntn1P12960 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cntn1P12960 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Cntn1P12960 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
Cntn1P12960 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.04□□□□□ -0.48
Cntn1P12960 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cntn1P12960 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.04□□□□□ -0.48
Cntn1P12960 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Cntn1P12960 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cntn1P12960 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
Cntn1P12960 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Mir877-201ENSMUST00000104738 85 ntBASIC12.04□□□□□ -0.48
Cntn1P12960 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cntn1P12960 Gm15808-201ENSMUST00000119046 604 ntBASIC12.04□□□□□ -0.48
Cntn1P12960 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.04□□□□□ -0.48
Cntn1P12960 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.04□□□□□ -0.48
Cntn1P12960 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC12.04□□□□□ -0.48
Cntn1P12960 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
Cntn1P12960 Gm25668-201ENSMUST00000157700 129 ntBASIC12.04□□□□□ -0.48
Cntn1P12960 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
Cntn1P12960 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.04□□□□□ -0.48
Cntn1P12960 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.04□□□□□ -0.48
Cntn1P12960 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Cntn1P12960 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.04□□□□□ -0.48
Cntn1P12960 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Cntn1P12960 Rab17-201ENSMUST00000027529 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cntn1P12960 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms