Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Fv4P11370 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Fv4P11370 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Gm13492-201ENSMUST00000119772 665 ntBASIC12.13□□□□□ -0.47
Fv4P11370 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Gm11964-201ENSMUST00000120982 444 ntBASIC12.13□□□□□ -0.47
Fv4P11370 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.13□□□□□ -0.47
Fv4P11370 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC12.13□□□□□ -0.47
Fv4P11370 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Fv4P11370 Gm5035-201ENSMUST00000215581 927 ntBASIC12.13□□□□□ -0.47
Fv4P11370 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Gm8227-201ENSMUST00000223306 571 ntBASIC12.13□□□□□ -0.47
Fv4P11370 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Fv4P11370 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Fv4P11370 Gm6091-201ENSMUST00000098307 165 ntBASIC12.13□□□□□ -0.47
Fv4P11370 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Fv4P11370 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.13□□□□□ -0.47
Fv4P11370 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Fv4P11370 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Fv4P11370 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Fv4P11370 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Fv4P11370 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Fv4P11370 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.12□□□□□ -0.47
Fv4P11370 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.12□□□□□ -0.47
Fv4P11370 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Gm29649-201ENSMUST00000185649 419 ntBASIC12.12□□□□□ -0.47
Fv4P11370 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.12□□□□□ -0.47
Fv4P11370 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC12.12□□□□□ -0.47
Fv4P11370 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.12□□□□□ -0.47
Fv4P11370 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.12□□□□□ -0.47
Fv4P11370 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Fv4P11370 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Fv4P11370 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Fv4P11370 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Fv4P11370 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.11□□□□□ -0.47
Fv4P11370 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.11□□□□□ -0.47
Fv4P11370 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Fv4P11370 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Fv4P11370 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Fv4P11370 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms