Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC10.94□□□□□ -0.66
UbbP0CG49 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
UbbP0CG49 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
UbbP0CG49 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
UbbP0CG49 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
UbbP0CG49 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.94□□□□□ -0.66
UbbP0CG49 Gm43102-201ENSMUST00000201004 2324 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.93□□□□□ -0.66
UbbP0CG49 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
UbbP0CG49 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Mir7654-201ENSMUST00000185082 70 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC10.93□□□□□ -0.66
UbbP0CG49 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC10.93□□□□□ -0.66
UbbP0CG49 AC154687.2-201ENSMUST00000223853 640 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Gm10371-202ENSMUST00000228010 1081 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Mir339-201ENSMUST00000083659 96 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
UbbP0CG49 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.93□□□□□ -0.66
UbbP0CG49 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
UbbP0CG49 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
UbbP0CG49 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
UbbP0CG49 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
UbbP0CG49 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC10.92□□□□□ -0.66
UbbP0CG49 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC10.92□□□□□ -0.66
UbbP0CG49 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Mir7023-201ENSMUST00000185093 64 ntBASIC10.92□□□□□ -0.66
UbbP0CG49 Gm43416-201ENSMUST00000201916 1015 ntBASIC10.92□□□□□ -0.66
UbbP0CG49 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC10.92□□□□□ -0.66
UbbP0CG49 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC10.92□□□□□ -0.66
UbbP0CG49 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 AC125117.1-201ENSMUST00000228121 468 ntBASIC10.92□□□□□ -0.66
UbbP0CG49 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
UbbP0CG49 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms