Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TnfP06804 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC13.32□□□□□ -0.28
TnfP06804 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC13.32□□□□□ -0.28
TnfP06804 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
TnfP06804 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC13.32□□□□□ -0.28
TnfP06804 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TnfP06804 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TnfP06804 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC13.32□□□□□ -0.28
TnfP06804 Gm45691-201ENSMUST00000206905 1120 ntBASIC13.32□□□□□ -0.28
TnfP06804 Gm5363-201ENSMUST00000211927 938 ntBASIC13.32□□□□□ -0.28
TnfP06804 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
TnfP06804 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
TnfP06804 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
TnfP06804 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
TnfP06804 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
TnfP06804 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.31□□□□□ -0.28
TnfP06804 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TnfP06804 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
TnfP06804 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC13.31□□□□□ -0.28
TnfP06804 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
TnfP06804 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Gm44262-201ENSMUST00000204969 372 ntBASIC13.31□□□□□ -0.28
TnfP06804 Gm18212-201ENSMUST00000211678 889 ntBASIC13.31□□□□□ -0.28
TnfP06804 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
TnfP06804 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC13.31□□□□□ -0.28
TnfP06804 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.31□□□□□ -0.28
TnfP06804 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.31□□□□□ -0.28
TnfP06804 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
TnfP06804 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Gm45342-201ENSMUST00000210903 1363 ntBASIC13.31□□□□□ -0.28
TnfP06804 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
TnfP06804 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
TnfP06804 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.3□□□□□ -0.28
TnfP06804 Gm12015-201ENSMUST00000117065 843 ntBASIC13.3□□□□□ -0.28
TnfP06804 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.3□□□□□ -0.28
TnfP06804 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.3□□□□□ -0.28
TnfP06804 Gm16570-201ENSMUST00000161951 436 ntBASIC13.3□□□□□ -0.28
TnfP06804 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.3□□□□□ -0.28
TnfP06804 Gm2260-201ENSMUST00000184965 657 ntBASIC13.3□□□□□ -0.28
TnfP06804 Rprl1-202ENSMUST00000198476 238 ntBASIC13.3□□□□□ -0.28
TnfP06804 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TnfP06804 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.3□□□□□ -0.28
TnfP06804 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms