Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trdmt1O55055 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trdmt1O55055 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.8□□□□□ -0.2
Trdmt1O55055 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.8□□□□□ -0.2
Trdmt1O55055 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Mir7677-201ENSMUST00000184226 67 ntBASIC13.8□□□□□ -0.2
Trdmt1O55055 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.8□□□□□ -0.2
Trdmt1O55055 Gm21811-201ENSMUST00000096485 930 ntBASIC13.8□□□□□ -0.2
Trdmt1O55055 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.8□□□□□ -0.2
Trdmt1O55055 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Gm6580-201ENSMUST00000117504 1357 ntBASIC13.8□□□□□ -0.2
Trdmt1O55055 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trdmt1O55055 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Trdmt1O55055 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trdmt1O55055 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trdmt1O55055 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Trdmt1O55055 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Trdmt1O55055 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Trdmt1O55055 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trdmt1O55055 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Gm11941-201ENSMUST00000119904 610 ntBASIC13.79□□□□□ -0.2
Trdmt1O55055 Gm15432-201ENSMUST00000121106 195 ntBASIC13.79□□□□□ -0.2
Trdmt1O55055 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
Trdmt1O55055 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Trdmt1O55055 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.79□□□□□ -0.2
Trdmt1O55055 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC13.79□□□□□ -0.2
Trdmt1O55055 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Trdmt1O55055 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC13.79□□□□□ -0.2
Trdmt1O55055 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.79□□□□□ -0.2
Trdmt1O55055 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.79□□□□□ -0.2
Trdmt1O55055 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Gm5455-201ENSMUST00000058710 715 ntBASIC13.79□□□□□ -0.2
Trdmt1O55055 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.79□□□□□ -0.2
Trdmt1O55055 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.79□□□□□ -0.2
Trdmt1O55055 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.79□□□□□ -0.2
Trdmt1O55055 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Trdmt1O55055 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trdmt1O55055 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Trdmt1O55055 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trdmt1O55055 Mir680-2-201ENSMUST00000102163 110 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms