Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.93□□□□□ -0.34
Trove2O08848 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Trove2O08848 AL593843.1-201ENSMUST00000195891 145 ntBASIC12.93□□□□□ -0.34
Trove2O08848 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.93□□□□□ -0.34
Trove2O08848 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.93□□□□□ -0.34
Trove2O08848 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Gm15823-201ENSMUST00000064305 670 ntBASIC12.93□□□□□ -0.34
Trove2O08848 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trove2O08848 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trove2O08848 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trove2O08848 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trove2O08848 Gm43365-201ENSMUST00000196522 2106 ntBASIC12.92□□□□□ -0.34
Trove2O08848 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Trove2O08848 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.92□□□□□ -0.34
Trove2O08848 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.92□□□□□ -0.34
Trove2O08848 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.92□□□□□ -0.34
Trove2O08848 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trove2O08848 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.92□□□□□ -0.34
Trove2O08848 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trove2O08848 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trove2O08848 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.92□□□□□ -0.34
Trove2O08848 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.92□□□□□ -0.34
Trove2O08848 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trove2O08848 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC12.91□□□□□ -0.34
Trove2O08848 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.91□□□□□ -0.34
Trove2O08848 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.91□□□□□ -0.34
Trove2O08848 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
Trove2O08848 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Trove2O08848 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC12.91□□□□□ -0.34
Trove2O08848 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Trove2O08848 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.91□□□□□ -0.34
Trove2O08848 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Gm13689-201ENSMUST00000119360 685 ntBASIC12.91□□□□□ -0.34
Trove2O08848 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.91□□□□□ -0.34
Trove2O08848 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
Trove2O08848 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.91□□□□□ -0.34
Trove2O08848 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trove2O08848 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.91□□□□□ -0.34
Trove2O08848 Gm26315-201ENSMUST00000083890 321 ntBASIC12.91□□□□□ -0.34
Trove2O08848 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.91□□□□□ -0.34
Trove2O08848 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
Trove2O08848 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.91□□□□□ -0.34
Trove2O08848 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trove2O08848 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms