Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.09□□□□□ -0.31
Ebf3O08791 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Ebf3O08791 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.08□□□□□ -0.31
Ebf3O08791 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Ebf3O08791 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ebf3O08791 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
Ebf3O08791 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Ebf3O08791 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Gm14130-201ENSMUST00000118417 987 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Gm11439-201ENSMUST00000118598 409 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Gm14277-201ENSMUST00000121195 360 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Gm15547-201ENSMUST00000122152 333 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Gm13570-201ENSMUST00000140763 309 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Tmem255b-202ENSMUST00000167505 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC13.08□□□□□ -0.32
Ebf3O08791 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Ebf3O08791 Gm23363-201ENSMUST00000175024 79 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Gm9445-201ENSMUST00000207454 1285 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC13.08□□□□□ -0.32
Ebf3O08791 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13.08□□□□□ -0.32
Ebf3O08791 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.08□□□□□ -0.32
Ebf3O08791 Gm3287-205ENSMUST00000228893 1332 ntBASIC13.08□□□□□ -0.32
Ebf3O08791 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ebf3O08791 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.07□□□□□ -0.32
Ebf3O08791 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC13.07□□□□□ -0.32
Ebf3O08791 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Ebf3O08791 Gm27046-201ENSMUST00000182160 463 ntBASIC13.07□□□□□ -0.32
Ebf3O08791 Mir7221-201ENSMUST00000184009 72 ntBASIC13.07□□□□□ -0.32
Ebf3O08791 Gstp-ps-201ENSMUST00000195526 631 ntBASIC13.07□□□□□ -0.32
Ebf3O08791 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC13.07□□□□□ -0.32
Ebf3O08791 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.07□□□□□ -0.32
Ebf3O08791 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ebf3O08791 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Gm9333-201ENSMUST00000205452 1323 ntBASIC13.07□□□□□ -0.32
Ebf3O08791 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ebf3O08791 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.06□□□□□ -0.32
Ebf3O08791 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.06□□□□□ -0.32
Ebf3O08791 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ebf3O08791 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.06□□□□□ -0.32
Ebf3O08791 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ebf3O08791 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ebf3O08791 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ebf3O08791 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms