Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm9083-201ENSMUST00000120423 819 ntBASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm39404-201ENSMUST00000216350 313 ntBASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Chrna9G3X8Z7 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Gm35960-201ENSMUST00000202712 767 ntBASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Gm6266-201ENSMUST00000203844 806 ntBASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Chrna9G3X8Z7 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna9G3X8Z7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna9G3X8Z7 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna9G3X8Z7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna9G3X8Z7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna9G3X8Z7 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Chrna9G3X8Z7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.46□□□□□ -0.26
Chrna9G3X8Z7 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Gm13342-201ENSMUST00000121055 207 ntBASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Gm44405-201ENSMUST00000198952 126 ntBASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Chrna9G3X8Z7 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms