Protein–RNA interactions for Protein: F6V035

Ccdc149, Coiled-coil domain-containing 149, mousemouse

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc149F6V035 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ccdc149F6V035 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc149F6V035 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc149F6V035 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc149F6V035 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc149F6V035 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc149F6V035 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
Ccdc149F6V035 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc149F6V035 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.77□□□□□ -0.36
Ccdc149F6V035 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ccdc149F6V035 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.77□□□□□ -0.36
Ccdc149F6V035 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.77□□□□□ -0.36
Ccdc149F6V035 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.77□□□□□ -0.37
Ccdc149F6V035 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.77□□□□□ -0.37
Ccdc149F6V035 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ccdc149F6V035 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm12015-201ENSMUST00000117065 843 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm13996-201ENSMUST00000118456 430 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm4909-201ENSMUST00000118749 794 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm6963-201ENSMUST00000147879 379 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm5070-201ENSMUST00000177599 862 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm8385-201ENSMUST00000058999 643 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.76□□□□□ -0.37
Ccdc149F6V035 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ccdc149F6V035 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms