Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm9095-201ENSMUST00000117607 881 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm12274-201ENSMUST00000120062 385 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm9097-201ENSMUST00000120514 880 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm44506-201ENSMUST00000206278 965 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm18124-201ENSMUST00000210695 706 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm7701-201ENSMUST00000163185 1479 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.18□□□□□ -0.46
Col6a3E9PWQ3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Sh2d1a-203ENSMUST00000115070 782 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Mir1190-201ENSMUST00000116925 96 ntBASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Gm13290-201ENSMUST00000177806 968 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Gm44315-201ENSMUST00000203041 219 ntBASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Col6a3E9PWQ3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Gm26272-201ENSMUST00000179241 132 ntBASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Rian-208ENSMUST00000182370 352 ntTSL 3 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Col6a3E9PWQ3 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms