Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Gm12291-201ENSMUST00000121627 311 ntBASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Gm12887B1AVM1 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Gm12887B1AVM1 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Gm12887B1AVM1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.79
Gm12887B1AVM1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.79
Gm12887B1AVM1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Gm12887B1AVM1 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Gm12887B1AVM1 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Gm12887B1AVM1 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Gm17837-201ENSMUST00000186435 985 ntBASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 AC173210.1-201ENSMUST00000222341 1131 ntBASIC10.14□□□□□ -0.79
Gm12887B1AVM1 AC132317.1-201ENSMUST00000227227 962 ntBASIC10.14□□□□□ -0.79
Gm12887B1AVM1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Exd1-201ENSMUST00000060009 6042 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Gm12887B1AVM1 AC101945.2-201ENSMUST00000227886 1377 ntBASIC10.14□□□□□ -0.79
Gm12887B1AVM1 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm14132-201ENSMUST00000117188 1719 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm16202-201ENSMUST00000117532 544 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm27430-201ENSMUST00000184585 107 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm44333-201ENSMUST00000197168 107 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm5279-201ENSMUST00000199575 745 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Gm7775-201ENSMUST00000218871 853 ntBASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC10.13□□□□□ -0.79
Gm12887B1AVM1 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms